Package: kmed 0.4.2

kmed: Distance-Based k-Medoids

Algorithms of distance-based k-medoids clustering: simple and fast k-medoids, ranked k-medoids, and increasing number of clusters in k-medoids. Calculate distances for mixed variable data such as Gower, Podani, Wishart, Huang, Harikumar-PV, and Ahmad-Dey. Cluster validation applies internal and relative criteria. The internal criteria includes silhouette index and shadow values. The relative criterium applies bootstrap procedure producing a heatmap with a flexible reordering matrix algorithm such as complete, ward, or average linkages. The cluster result can be plotted in a marked barplot or pca biplot.

Authors:Weksi Budiaji [aut, cre]

kmed_0.4.2.tar.gz
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kmed.pdf |kmed.html
kmed/json (API)
NEWS

# Install 'kmed' in R:
install.packages('kmed', repos = c('https://weksi-budiaji.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.15 score 140 scripts 658 downloads 16 exports 28 dependencies

Last updated 2 years agofrom:524e990059. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 29 2024
R-4.5-winOKOct 29 2024
R-4.5-linuxOKOct 29 2024
R-4.4-winOKOct 29 2024
R-4.4-macOKOct 29 2024
R-4.3-winOKOct 29 2024
R-4.3-macOKOct 29 2024

Exports:barplotnumclustbootclustheatmapconsensusmatrixcooccurcsvdistmixdistNumericfastkmedinckmedmatchingmsvpcabiplotrankkmedsilskm

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr

kmed: Distance-Based K-Medoids

Rendered fromkmedoid.Rmdusingknitr::rmarkdownon Oct 29 2024.

Last update: 2022-08-29
Started: 2018-02-12